PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0042s0084.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 313aa    MW: 33904.3 Da    PI: 10.7308
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0042s0084.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.53.4e-10280299322
                          -SS-EEEEEEE--TT-SS-E CS
                 WRKY   3 DgynWrKYGqKevkgsefpr 22 
                          D+++WrKYGqK++kgs++pr
  Kaladp0042s0084.2.p 280 DEFSWRKYGQKPIKGSPHPR 299
                          99*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105339.9E-16232276IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.4E-9267299IPR003657WRKY domain
PROSITE profilePS5081111.612273299IPR003657WRKY domain
SuperFamilySSF1182901.83E-7275299IPR003657WRKY domain
SMARTSM007749.3E-4278312IPR003657WRKY domain
PfamPF031063.6E-6280299IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MAVELMMGYR AAAAENNLPA RMEEAASAGL QSVEQLIRLL SQRQQQMDRS NSSNSCVNES  60
SSKVESSDLD YGAVADVAVN KFKKMISLLD RSRTGHARFR RAPVAQRAAD PVAQTSLRSE  120
EKASAQSSLN GGPRAIPTST SSQRLPPLPQ HHHHHHHHSL PVHHKIVHSA NTVLTKTAPK  180
DSTATISFSG ASSFVSGLSG ETESVQPSMS SGFQFTLMSQ SSGKPPLSTS LKRKCSSVDD  240
SARCGGSSAR CHCSKKRKSR VKRVVRIPAI SLKMADIPPD EFSWRKYGQK PIKGSPHPRR  300
PGVDKDLTFV DF*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00450DAPTransfer from AT4G24240Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015884353.11e-91PREDICTED: probable WRKY transcription factor 7
TrEMBLC7ENF85e-91C7ENF8_IPOBA; WRKY1
STRINGSolyc04g078550.2.12e-84(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.13e-41WRKY DNA-binding protein 7